SubtiBank SubtiBank
ynfC [2019-02-19 19:32:48]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ynfC [2019-02-19 19:32:48]

unknown
locus
BSU18110
pI
10.22
mw
15.23 kDa
protein length
136 aa Sequence Blast
gene length
411 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    1,938,066 1,938,476

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    genes
    [gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]
    description
    [Pubmed|21815947]

    additional information

  • the mRNA is substantially stabilized upon depletion of [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] (the half-life of the mRNA increases from 3.5 to 50 min) [PubMed|21815947]
  • view in new tab

    Biological materials

    Mutant

  • GP1966 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::''gfp erm''), available in [SW|Jrg Stlke]'s lab
  • BKE18110 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAAAAGTAAACCTGA, downstream forward: _UP4_TAACGAAAATATGAGGAGGC
  • BKK18110 ([gene|704A43D2EA6E948278314F05D4D0F186E647A3AB|ynfC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTAAAAGTAAACCTGA, downstream forward: _UP4_TAACGAAAATATGAGGAGGC
  • References

  • 21815947